I could see Stephen stepping back and turning most of the football operation over to random football types, as long as they operate within the financial boundaries he sets of course.
I don't think he cares about credit or spotlight like Jerry, and it's possible that at the moment he is kind of just trying to play both sides since Jerry will always stick his nose into shit and maybe this is the only way Stephen thinks he can placate him while running a somewhat normal personnel operation.
Or maybe he's been completely incepted and thinks this is the only way to do it and nothing changes, no way of really knowing, but I think there's a possibility that he shifts things around once Jerry's nonsense isn't on the table anymore, similar to how McClay largely runs the draft.