I don't know if other organizations follow the same philosophy but looking at their last several MLB draft classes, it looks like the Braves are trying way too hard to replicate the pitching success they had throughout the 90s. If you look at their draft classes, about 70% of their top 10-15 picks are used on pitchers.
It's as if finding every day positional players is an afterthought for them. They haven't had a dynamic everyday player/big bat come through the farm system since the 90s. They've had a few nice players here and there like McCann, Freeman, and Heyward, but aside from McCann it's been a long time since they've drafted a player who you could legitimately make an argument that he was the best player at his position.
It's as if they forgot that even though we had Glavine, Maddox, and Smoltz leading the way, we still had some of the game's better hitters in our lineup. Chipper Jones, McGriff, Galarraga, Andrew Jones, Dave Justice, Javy Lopez, Kenny Lofton, Klesko, etc.
Their current draft strategy is probably the main reason that they've been one of the worst hitting teams in the league over the past 5 or so years.
I don't follow the MLB draft prospects that closely but I think they need to balance out the weight of their draft class and target more everyday players with those early round picks.